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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs9368254 chr6:20900120 C/T OR5V1 chr6:29323007-29399744:- -0.67 -8.28 4.54E-11 Box Plot
ACC rs9368255 chr6:20900228 C/T OR5V1 chr6:29323007-29399744:- -0.67 -8.28 4.54E-11 Box Plot
ACC rs9372518 chr6:119279547 T/A ACTR3C chr7:149941005-150020814:- 1.01 7.8 2.6E-10 Box Plot
ACC rs9385064 chr6:119273177 A/G ACTR3C chr7:149941005-150020814:- -1.01 -7.8 2.6E-10 Box Plot
ACC rs939218 chr2:12732776 A/T GAGE2D chrX:49207160-49214420:+ -0.56 -8.93 4.42E-12 Box Plot
ACC rs9401108 chr6:119279545 T/G ACTR3C chr7:149941005-150020814:- 1.01 7.8 2.6E-10 Box Plot
ACC rs9409687 chr9:96521357 G/A PLEKHA7 chr11:16798864-17035990:- -1.11 -7.56 6.27E-10 Box Plot
ACC rs9409695 chr9:96540239 G/C PLEKHA7 chr11:16798864-17035990:- -1.1 -7.56 6.36E-10 Box Plot
ACC rs9537476 chr13:57371988 G/A MAGEA4 chrX:151080981-151093642:+ 1.19 7.61 5.36E-10 Box Plot
ACC rs9563797 chr13:60795738 G/A PRAMEF16 chr1:13495254-13498260:+ 0.73 8.74 8.63E-12 Box Plot
ACC rs9570270 chr13:60788083 C/T PRAMEF16 chr1:13495254-13498260:+ 0.73 8.74 8.63E-12 Box Plot
ACC rs9570271 chr13:60794219 G/A PRAMEF16 chr1:13495254-13498260:+ 0.73 8.74 8.63E-12 Box Plot
ACC rs9570272 chr13:60794354 C/A PRAMEF16 chr1:13495254-13498260:+ 0.73 8.74 8.63E-12 Box Plot
ACC rs9570273 chr13:60795598 A/G PRAMEF16 chr1:13495254-13498260:+ 0.73 8.74 8.63E-12 Box Plot
ACC rs9586508 chr13:105095228 A/C DUPD1 chr10:76797594-76818272:- 1.18 10.3 3.76E-14 Box Plot